J'utilise Jupyter Notebook et je veux importer une boîte à outils externe appelée bluepyopt. Comme il ne fonctionne actuellement qu'en Python 2.7, j'ai mis en place un noyau Python 2.7 comme décrit here. Je peux donc changer mon noyau en python 2 dans Jupyter Notebook. Si je veux importer le module en utilisantPython: installer un module avec succès mais il n'est pas disponible via l'import
import bluepyopt as bpop
Je reçois l'erreur
ModuleNotFoundError Traceback (most recent call last)
<ipython-input-1-83e46e18aae9> in <module>()
3
4 # to create electrical cell models
----> 5 import bluepyopt as bpop
6 import bluepyopt.ephys as ephys
7
ModuleNotFoundError: No module named 'bluepyopt'
installer bluepyopt la façon dont j'installe habituellement des modules avec
!pip install bluepyopt
Cela donne aussi me une sortie super loooooong extraordinaire. Je ne sais pas ce qui est important ici, alors je vais tout afficher pour être sûr. Cela ne se produit que dans Python 2.7, mais en python 3 tout fonctionne bien! Une idée de pourquoi c'est comme ça?
Collecting bluepyopt
Collecting efel>=2.11 (from bluepyopt)
Using cached efel-2.12.11.tar.gz
Collecting ipyparallel (from bluepyopt)
Using cached ipyparallel-6.0.2-py2.py3-none-any.whl
Requirement already satisfied: Jinja2>=2.8 in c:\users\alex\anaconda3\lib\site-packages (from bluepyopt)
Requirement already satisfied: pickleshare>=0.7.3 in c:\users\alex\anaconda3\lib\site-packages (from bluepyopt)
Requirement already satisfied: numpy>=1.6 in c:\users\alex\anaconda3\lib\site-packages (from bluepyopt)
Collecting scoop>=0.7 (from bluepyopt)
Requirement already satisfied: pandas>=0.18 in c:\users\alex\anaconda3\lib\site-packages (from bluepyopt)
Collecting future (from bluepyopt)
Requirement already satisfied: deap in c:\users\alex\anaconda3\lib\site-packages (from bluepyopt)
Requirement already satisfied: six in c:\users\alex\anaconda3\lib\site-packages (from efel>=2.11->bluepyopt)
Requirement already satisfied: ipython>=4 in c:\users\alex\anaconda3\lib\site-packages (from ipyparallel->bluepyopt)
Requirement already satisfied: ipykernel in c:\users\alex\anaconda3\lib\site-packages (from ipyparallel->bluepyopt)
Requirement already satisfied: python-dateutil>=2.1 in c:\users\alex\anaconda3\lib\site-packages (from ipyparallel->bluepyopt)
Requirement already satisfied: pyzmq>=13 in c:\users\alex\anaconda3\lib\site-packages (from ipyparallel->bluepyopt)
Requirement already satisfied: tornado>=4 in c:\users\alex\anaconda3\lib\site-packages (from ipyparallel->bluepyopt)
Requirement already satisfied: ipython-genutils in c:\users\alex\anaconda3\lib\site-packages (from ipyparallel->bluepyopt)
Requirement already satisfied: jupyter-client in c:\users\alex\anaconda3\lib\site-packages (from ipyparallel->bluepyopt)
Requirement already satisfied: decorator in c:\users\alex\anaconda3\lib\site-packages (from ipyparallel->bluepyopt)
Requirement already satisfied: MarkupSafe>=0.23 in c:\users\alex\anaconda3\lib\site-packages (from Jinja2>=2.8->bluepyopt)
Requirement already satisfied: greenlet>=0.3.4 in c:\users\alex\anaconda3\lib\site-packages (from scoop>=0.7->bluepyopt)
Collecting argparse>=1.1 (from scoop>=0.7->bluepyopt)
Using cached argparse-1.4.0-py2.py3-none-any.whl
Requirement already satisfied: pytz>=2011k in c:\users\alex\anaconda3\lib\site-packages (from pandas>=0.18->bluepyopt)
Building wheels for collected packages: efel
Running setup.py bdist_wheel for efel: started
Running setup.py bdist_wheel for efel: finished with status 'error'
Complete output from command C:\Users\Alex\Anaconda3\python.exe -u -c "import setuptools, tokenize;__file__='C:\\Users\\Alex\\AppData\\Local\\Temp\\pip-build-cygqwlch\\efel\\setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d C:\Users\Alex\AppData\Local\Temp\tmp5k5lqwx6pip-wheel- --python-tag cp36:
running bdist_wheel
running build
running build_py
creating build
creating build\lib.win-amd64-3.6
creating build\lib.win-amd64-3.6\efel
copying efel\api.py -> build\lib.win-amd64-3.6\efel
copying efel\io.py -> build\lib.win-amd64-3.6\efel
copying efel\settings.py -> build\lib.win-amd64-3.6\efel
copying efel\_version.py -> build\lib.win-amd64-3.6\efel
copying efel\__init__.py -> build\lib.win-amd64-3.6\efel
copying efel\DependencyV5.txt -> build\lib.win-amd64-3.6\efel
creating build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\Utils.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\LibV1.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\LibV2.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\LibV3.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\LibV4.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\LibV5.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\FillFptrTable.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\DependencyTree.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\efel.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\cfeature.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\Global.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\mapoperations.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\types.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\eFELLogger.h -> build\lib.win-amd64-3.6\efel\cppcore
UPDATING build\lib.win-amd64-3.6\efel/_version.py
set build\lib.win-amd64-3.6\efel/_version.py to '2.12.11'
running build_ext
building 'efel.cppcore' extension
error: Microsoft Visual C++ 14.0 is required. Get it with "Microsoft Visual C++ Build Tools": http://landinghub.visualstudio.com/visual-cpp-build-tools
----------------------------------------
Running setup.py clean for efel
Failed to build efel
Installing collected packages: efel, ipyparallel, argparse, scoop, future, bluepyopt
Running setup.py install for efel: started
Running setup.py install for efel: finished with status 'error'
Complete output from command C:\Users\Alex\Anaconda3\python.exe -u -c "import setuptools, tokenize;__file__='C:\\Users\\Alex\\AppData\\Local\\Temp\\pip-build-cygqwlch\\efel\\setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record C:\Users\Alex\AppData\Local\Temp\pip-n69ud86n-record\install-record.txt --single-version-externally-managed --compile:
running install
running build
running build_py
creating build
creating build\lib.win-amd64-3.6
creating build\lib.win-amd64-3.6\efel
copying efel\api.py -> build\lib.win-amd64-3.6\efel
copying efel\io.py -> build\lib.win-amd64-3.6\efel
copying efel\settings.py -> build\lib.win-amd64-3.6\efel
copying efel\_version.py -> build\lib.win-amd64-3.6\efel
copying efel\__init__.py -> build\lib.win-amd64-3.6\efel
copying efel\DependencyV5.txt -> build\lib.win-amd64-3.6\efel
creating build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\Utils.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\LibV1.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\LibV2.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\LibV3.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\LibV4.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\LibV5.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\FillFptrTable.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\DependencyTree.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\efel.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\cfeature.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\Global.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\mapoperations.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\types.h -> build\lib.win-amd64-3.6\efel\cppcore
copying efel\cppcore\eFELLogger.h -> build\lib.win-amd64-3.6\efel\cppcore
UPDATING build\lib.win-amd64-3.6\efel/_version.py
set build\lib.win-amd64-3.6\efel/_version.py to '2.12.11'
running build_ext
building 'efel.cppcore' extension
error: Microsoft Visual C++ 14.0 is required. Get it with "Microsoft Visual C++ Build Tools": http://landinghub.visualstudio.com/visual-cpp-build-tools
----------------------------------------
Failed building wheel for efel
Command "C:\Users\Alex\Anaconda3\python.exe -u -c "import setuptools, tokenize;__file__='C:\\Users\\Alex\\AppData\\Local\\Temp\\pip-build-cygqwlch\\efel\\setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record C:\Users\Alex\AppData\Local\Temp\pip-n69ud86n-record\install-record.txt --single-version-externally-managed --compile" failed with error code 1 in C:\Users\Alex\AppData\Local\Temp\pip-build-cygqwlch\efel\
Requirement already satisfied: NEURON in c:\users\alex\anaconda3\lib\site-packages
Quelques informations utiles peut-être lors de l'utilisation du noyau python 2 Jupyter Notebook:
In [1]:
import sys
sys.executable
Out [1]:
'C:\\Users\\Alex\\Anaconda3\\envs\\ipykernel_py2\\python.exe' #kernel python 2.7
'C:\\Users\\Alex\\Anaconda3\\python.exe' #kernel python 3
In [2]:
from jupyter_core.paths import jupyter_data_dir
print(jupyter_data_dir())
Out[2]:
C:\Users\Alex\AppData\Roaming\jupyter
In[3]:
sys.path
Out[3]:
['',
'C:\\Users\\Alex\\Anaconda3\\envs\\ipykernel_py2\\python27.zip',
'C:\\Users\\Alex\\Anaconda3\\envs\\ipykernel_py2\\DLLs',
'C:\\Users\\Alex\\Anaconda3\\envs\\ipykernel_py2\\lib',
'C:\\Users\\Alex\\Anaconda3\\envs\\ipykernel_py2\\lib\\plat-win',
'C:\\Users\\Alex\\Anaconda3\\envs\\ipykernel_py2\\lib\\lib-tk',
'C:\\Users\\Alex\\Anaconda3\\envs\\ipykernel_py2',
'C:\\Users\\Alex\\Anaconda3\\envs\\ipykernel_py2\\lib\\site-packages',
'C:\\Users\\Alex\\Anaconda3\\envs\\ipykernel_py2\\lib\\site-packages\\IPython\\extensions',
'C:\\Users\\Alex\\.ipython']
In[4]:
!jupyter kernelspec list
Out[4]:
Available kernels:
python3 C:\Users\Alex\Anaconda3\share\jupyter\kernels\python3
python2 C:\ProgramData\jupyter\kernels\python2
double possible de [Erreur lors de l'installation lxml par pip: Microsoft Visual 14.0 C++ est requis] (https://stackoverflow.com/questions/38949519/error-while-installing-lxml-through-pip-microsoft-visual-c-14-0-is-required) – phd